Johannes Söding
Education
1996
|
PhD in Physics, University of Heidelberg |
| 1992 |
Diplom (MSc) in Physics, University of Heidelberg |
Academic positions
| 2007-present |
Research group leader at the Gene Center |
| 2002-2007 |
Staff scientist at the Max-Planck-Institute for Developmental Biology in Tübingen |
| 1999-2002 |
Management consultant with the Boston Consulting Group in Frankfurt |
| 1996-1998 |
Postdoc at the École Normale Supérieure in Paris |
| 1993-1996 |
Ph.D. work in experimental physics at the Max Planck Institute for Nuclear Physics in Heidelberg |
Grants
| 2012-2015 |
|
"Systems biology of gene expression", application for the BMBF call "e:Bio Innovationswettbewerb Systembiologie", selected for final submission; 234 k€ (own share) |
| 2012-2015 |
|
"Probabilistic protein structure modeling with hybrid data" in the Graduiertenkolleg GRK1721 "Integrated Analysis of Macromolecular Complexes and Hybrid Methods in Genome Biology " from the DFG; 180 k€ (own share) |
| 2011-2015 |
|
Coauthor of application "Forschungszentrum für molekulare Biosysteme (BioSysM)", financed by BMBF and Bavaria; 28.6 M€ (total) |
| 2009-2012 |
|
"Computational modeling of the yeast transcriptional network and its regulation by Mediator" in SFB646 "Networks in genome expression and maintenance" from the DFG; 384 k€ (own share) |
| 2008-2011 |
|
Gastprofessur "Computational Biochemistry" from LMUexcellent program financed by the BMBF (speaker: Patrick Cramer); ca. 400 k€ (own share) |
| 2008-2010 |
|
"Entwicklung von Hochleistungsanalysetechnologien zur systembiologischen Untersuchung von mikro-RNAs" from LMUexcellent Investitionskonzept, with Klaus Förstemann;
14 k€ (own share) |
Awards & honors
| 2010 |
Best server for template-based protein structure prediction in CASP9 competition |
| 2006 |
Second-best server for protein structure prediction in CASP7 competition |
| 1996-1998 |
Feodor-Lynen scholarship of the Alexander-von-Humboldt foundation |
| 1988-1989 |
Full exchange scholarship of the Ludwig-Maximilians Universität München |
Memberships & Professional services
| Reviewer for Bioinformatics, NAR, PNAS, Genome Biol, Genome Res, and many others |
Reviewer for German-Israeli Foundation and Swiss National Science Foundation
|
Associate investigator of the Center for Integrated Protein Science excellence cluster
|
| Gene Center board member |
